PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.L8LRC
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 332aa    MW: 36843.5 Da    PI: 6.8721
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.L8LRCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH31.23.9e-10135182455
                  HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  +h+ +Er RR++i +++  L++l+P +    +k   Ka +L + ++Y++sLq
  Araip.L8LRC 135 SHSLAERVRREKISERMKYLQDLVPGC----NKITGKAGMLDEIINYVQSLQ 182
                  8**************************....999*****************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000831.56E-9129184No hitNo description
SuperFamilySSF474597.85E-15129189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.101.5E-15131189IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS5088815.618131181IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PfamPF000101.6E-7135182IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003533.8E-7137187IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006351Biological Processtranscription, DNA-templated
GO:0009637Biological Processresponse to blue light
GO:0009911Biological Processpositive regulation of flower development
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 332 aa     Download sequence    Send to blast
MTVLERQQAR TKKCIQQDLQ DNGSSLFDVF SDDYSSLIHM PPAPSSSSAI SSFVSPKKRK  60
SESHKVVVAQ QSHTKKEKRV KVSAEEDSSK MSEQITNKDE VASAENSIKG STSEPHNNKP  120
DYIHVRARRG QATDSHSLAE RVRREKISER MKYLQDLVPG CNKITGKAGM LDEIINYVQS  180
LQRQFLSMKL AAVNPRLELN VDDLFAKEVF PACAPNFEGI GMGSSEMTNN PAAYLDFNSV  240
QQLVSCSNGL INNIGMNMTP SPDMGLRKTI AAPLSVSLPE TFLDSSSCFN QVLPPSIWEG  300
EFQIQNLYNV AFDQPRTSSF PPSHPFTGTY EL
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016186990.10.0PREDICTED: transcription factor BEE 2-like
TrEMBLK7LP951e-113K7LP95_SOYBN; Uncharacterized protein
STRINGGLYMA11G12450.31e-113(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF36183463
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34530.14e-55cryptochrome-interacting basic-helix-loop-helix 1